A multicenter observational transcriptomic study investigated how diabetes mellitus (DM) and intermediate hyperglycemia (IH) influence the blood immune response in adults with newly diagnosed, bacteriologically confirmed pulmonary tuberculosis (TB). Participants were recruited between December 2013 and February 2016 from four sites in South Africa, Indonesia, Peru, and Romania. The study aimed to determine whether hyperglycemia alters the host blood transcriptome in TB and whether these changes affect established TB diagnostic transcriptomic signatures.
A total of 151 TB patients were classified as TB only, IH-TB, or DM-TB according to laboratory HbA1c criteria. Additional healthy controls (HCs) and individuals with DM without TB were recruited in South Africa and Romania. Patients were excluded if they had already started TB treatment, had multidrug-resistant TB, HIV infection, pregnancy, corticosteroid use, or other serious comorbidities. DM was defined as HbA1c ≥6.5% confirmed by repeat HbA1c ≥6.5% or fasting blood glucose ≥7 mmol/L, while IH was defined as HbA1c 5.7% to <6.5%. Venous blood was collected before TB treatment, and RNA sequencing was performed on 249 blood samples using polyA library preparation and single-read sequencing. Bioinformatic analyses included transcript quantification, differential gene expression, principal component analysis (PCA), modular enrichment analysis, and machine learning with random forest algorithms to evaluate published TB transcriptomic biomarkers.
Compared with healthy controls, TB alone was associated with upregulation of 345 genes, including known TB-associated genes such as C1QA, BATF2, SOCS3, and GBP5. DM alone produced relatively modest transcriptomic changes. In contrast, DM-TB showed marked transcriptomic perturbation, with 1,695 significantly upregulated genes and 1,623 significantly downregulated genes relative to healthy controls. Upregulated genes included inflammatory cytokines such as IL-1β, IL-15, IL-18, and IL-10, whereas downregulated genes included IL-8, IL-16, and IL-24. IH-TB demonstrated even greater transcriptomic disruption, with 2,576 upregulated and 2,140 downregulated genes. Similar findings were independently validated in the Romanian cohort. Comparative analyses showed that the TB transcriptional profile remained dominant, but hyperglycemia amplified its magnitude. PCA demonstrated that IH-TB and DM-TB clustered together, whereas healthy controls and DM without TB formed a separate cluster. Modular analysis showed stronger activation of inflammatory, myeloid cell, complement, and type I interferon pathways in IH-TB and DM-TB than in TB alone, together with greater suppression of natural killer cell and adaptive immune response modules, including T-cell and B-cell pathways. Combined analysis across all four countries confirmed these findings, identifying 292 upregulated and 130 downregulated genes in DM-TB versus TB only, and 432 upregulated and 126 downregulated genes in IH-TB versus TB only. The magnitude of differential expression generally increased with worsening hyperglycemia. Finally, established TB transcriptomic diagnostic signatures performed less well in patients with DM. The Kaforou signature achieved an AUC of 0.96 in TB-only patients but declined to 0.87 in DM-TB patients (ROC comparison P = .018), while the Sweeney signature also showed reduced performance (AUC 0.84).
The study concluded that both diabetes and intermediate hyperglycemia substantially amplify the blood transcriptomic response to active TB, with detectable effects already present before overt diabetes develops, and that these changes reduce the diagnostic performance of existing TB transcriptomic biomarkers. As an observational transcriptomic study, the findings demonstrate association rather than causation. Although the multicenter design across four countries supports generalizability, participants with HIV, multidrug-resistant TB, and several other comorbidities were excluded, which may limit applicability to those populations.
Source: Eckold C, Kumar V, Weiner J, Alisjahbana B, Riza AL, Ronacher K, Coronel J, Kerry-Barnard S, Malherbe ST, Kleynhans L, Stanley K. Impact of intermediate hyperglycemia and diabetes on immune dysfunction in tuberculosis. Clinical infectious diseases. 2021 Jan 1;72(1):69-78.